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Cluster: HRGMv2_0438_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0438_6 HRGMv2_0438_6_56 74777 77098 - GH20
CAZyme HRGMv2_0438_6 HRGMv2_0438_6_57 77095 78546 - GH125
CAZyme HRGMv2_0438_6 HRGMv2_0438_6_58 78561 80165 - GH63
pfam HRGMv2_0438_6 HRGMv2_0438_6_59 80187 81317 - Alk_phosphatase | Metalloenzyme
pfam HRGMv2_0438_6 HRGMv2_0438_6_60 81332 82195 - Exo_endo_phos
CAZyme HRGMv2_0438_6 HRGMv2_0438_6_61 82214 85144 - GH92
NULL(UNKNOWN) HRGMv2_0438_6 HRGMv2_0438_6_62 85230 85391 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0438_6 HRGMv2_0438_6_63 85345 86982 - 8.A.46.1.3
TC HRGMv2_0438_6 HRGMv2_0438_6_64 87002 90172 - 1.B.14.6.1
Gene ID: HRGMv2_0438_6_56
Type: CAZyme
Location: 74777 - 77098 (-)
Gene ID: HRGMv2_0438_6_57
Type: CAZyme
Location: 77095 - 78546 (-)
Gene ID: HRGMv2_0438_6_58
Type: CAZyme
Location: 78561 - 80165 (-)
Gene ID: HRGMv2_0438_6_59
Type: pfam
Location: 80187 - 81317 (-)
Gene ID: HRGMv2_0438_6_60
Type: pfam
Location: 81332 - 82195 (-)
Gene ID: HRGMv2_0438_6_61
Type: CAZyme
Location: 82214 - 85144 (-)
Gene ID: HRGMv2_0438_6_62
Type:
Location: 85230 - 85391 (+)
Gene ID: HRGMv2_0438_6_63
Type: TC
Location: 85345 - 86982 (-)
Gene ID: HRGMv2_0438_6_64
Type: TC
Location: 87002 - 90172 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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