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Cluster: HRGMv2_0438_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0438_5 HRGMv2_0438_5_62 56260 59757 + 1.B.14.6.1
pfam HRGMv2_0438_5 HRGMv2_0438_5_63 59771 61735 + SusD_RagB | SusD-like_3
pfam HRGMv2_0438_5 HRGMv2_0438_5_64 61756 62475 + DUF3823 | DUF3823_C
CAZyme HRGMv2_0438_5 HRGMv2_0438_5_65 62656 65673 + GH55_3
CAZyme HRGMv2_0438_5 HRGMv2_0438_5_66 65706 68708 + GH55_3
NULL(UNKNOWN) HRGMv2_0438_5 HRGMv2_0438_5_67 68925 69371 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0438_5 HRGMv2_0438_5_68 69438 70538 - DUF6340
TC HRGMv2_0438_5 HRGMv2_0438_5_69 70709 74035 - 3.A.5.1.1
Gene ID: HRGMv2_0438_5_62
Type: TC
Location: 56260 - 59757 (+)
Gene ID: HRGMv2_0438_5_63
Type: pfam
Location: 59771 - 61735 (+)
Gene ID: HRGMv2_0438_5_64
Type: pfam
Location: 61756 - 62475 (+)
Gene ID: HRGMv2_0438_5_65
Type: CAZyme
Location: 62656 - 65673 (+)
Gene ID: HRGMv2_0438_5_66
Type: CAZyme
Location: 65706 - 68708 (+)
Gene ID: HRGMv2_0438_5_67
Type:
Location: 68925 - 69371 (-)
Gene ID: HRGMv2_0438_5_68
Type: pfam
Location: 69438 - 70538 (-)
Gene ID: HRGMv2_0438_5_69
Type: TC
Location: 70709 - 74035 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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