Cluster: HRGMv2_0433_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0433
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0433_6 | HRGMv2_0433_6_8 | 7586 | 9562 | + | 1.B.14.15.2 |
| STP | HRGMv2_0433_6 | HRGMv2_0433_6_9 | 9607 | 10443 | + | SBP_bac_3 |
| pfam | HRGMv2_0433_6 | HRGMv2_0433_6_10 | 10425 | 11909 | - | PLDc | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| CAZyme | HRGMv2_0433_6 | HRGMv2_0433_6_11 | 12026 | 13177 | + | GT19 |
| pfam | HRGMv2_0433_6 | HRGMv2_0433_6_12 | 13174 | 13671 | + | LMWPc |
| NULL(UNKNOWN) | HRGMv2_0433_6 | HRGMv2_0433_6_13 | 13793 | 14098 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0433_6 | HRGMv2_0433_6_14 | 14203 | 14907 | - | 1.A.14.2.2 |
| pfam | HRGMv2_0433_6 | HRGMv2_0433_6_15 | 14980 | 16764 | - | tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1 |
| pfam | HRGMv2_0433_6 | HRGMv2_0433_6_16 | 17022 | 17846 | + | SBP_bac_1 | PBP_like | PBP_like_2 | SBP_bac_11 |
| TC | HRGMv2_0433_6 | HRGMv2_0433_6_17 | 17846 | 19051 | + | 3.A.1.7.5 |
| TC | HRGMv2_0433_6 | HRGMv2_0433_6_18 | 19058 | 19942 | + | 3.A.1.7.2 |
| TC | HRGMv2_0433_6 | HRGMv2_0433_6_19 | 19958 | 20710 | + | 3.A.1.7.1 |
Gene ID: HRGMv2_0433_6_8
Type: TC
Location: 7586 - 9562 (+)
Type: TC
Location: 7586 - 9562 (+)
Gene ID: HRGMv2_0433_6_9
Type: STP
Location: 9607 - 10443 (+)
Type: STP
Location: 9607 - 10443 (+)
Gene ID: HRGMv2_0433_6_10
Type: pfam
Location: 10425 - 11909 (-)
Type: pfam
Location: 10425 - 11909 (-)
Gene ID: HRGMv2_0433_6_11
Type: CAZyme
Location: 12026 - 13177 (+)
Type: CAZyme
Location: 12026 - 13177 (+)
Gene ID: HRGMv2_0433_6_12
Type: pfam
Location: 13174 - 13671 (+)
Type: pfam
Location: 13174 - 13671 (+)
Gene ID: HRGMv2_0433_6_13
Type:
Location: 13793 - 14098 (+)
Type:
Location: 13793 - 14098 (+)
Gene ID: HRGMv2_0433_6_14
Type: TC
Location: 14203 - 14907 (-)
Type: TC
Location: 14203 - 14907 (-)
Gene ID: HRGMv2_0433_6_15
Type: pfam
Location: 14980 - 16764 (-)
Type: pfam
Location: 14980 - 16764 (-)
Gene ID: HRGMv2_0433_6_16
Type: pfam
Location: 17022 - 17846 (+)
Type: pfam
Location: 17022 - 17846 (+)
Gene ID: HRGMv2_0433_6_17
Type: TC
Location: 17846 - 19051 (+)
Type: TC
Location: 17846 - 19051 (+)
Gene ID: HRGMv2_0433_6_18
Type: TC
Location: 19058 - 19942 (+)
Type: TC
Location: 19058 - 19942 (+)
Gene ID: HRGMv2_0433_6_19
Type: TC
Location: 19958 - 20710 (+)
Type: TC
Location: 19958 - 20710 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CALZFJ01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.