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Cluster: HRGMv2_0428_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0428_21 HRGMv2_0428_21_5 5109 6515 + 2.A.1.53.5
pfam HRGMv2_0428_21 HRGMv2_0428_21_6 6595 7113 - Ferritin | Rubrerythrin | Ferritin-like
pfam HRGMv2_0428_21 HRGMv2_0428_21_7 7242 9209 + DsbD_TM | Thioredoxin_7
CAZyme HRGMv2_0428_21 HRGMv2_0428_21_8 9206 10384 + GT4
pfam HRGMv2_0428_21 HRGMv2_0428_21_9 10441 11625 - OEP | OEP
TC HRGMv2_0428_21 HRGMv2_0428_21_10 11618 14716 - 2.A.6.1.5
pfam HRGMv2_0428_21 HRGMv2_0428_21_11 14730 15995 - HlyD_3 | HlyD_D23
NULL(UNKNOWN) HRGMv2_0428_21 HRGMv2_0428_21_12 16069 16491 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0428_21 HRGMv2_0428_21_13 16647 17876 - GT30
Gene ID: HRGMv2_0428_21_5
Type: TC
Location: 5109 - 6515 (+)
Gene ID: HRGMv2_0428_21_6
Type: pfam
Location: 6595 - 7113 (-)
Gene ID: HRGMv2_0428_21_7
Type: pfam
Location: 7242 - 9209 (+)
Gene ID: HRGMv2_0428_21_8
Type: CAZyme
Location: 9206 - 10384 (+)
Gene ID: HRGMv2_0428_21_9
Type: pfam
Location: 10441 - 11625 (-)
Gene ID: HRGMv2_0428_21_10
Type: TC
Location: 11618 - 14716 (-)
Gene ID: HRGMv2_0428_21_11
Type: pfam
Location: 14730 - 15995 (-)
Gene ID: HRGMv2_0428_21_12
Type:
Location: 16069 - 16491 (-)
Gene ID: HRGMv2_0428_21_13
Type: CAZyme
Location: 16647 - 17876 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
UBA940
→
Species
UBA940 sp900768115

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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