Cluster: HRGMv2_0428_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0428
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0428_12 | HRGMv2_0428_12_19 | 20290 | 21501 | - | GH177 |
| sulfatase | HRGMv2_0428_12 | HRGMv2_0428_12_20 | 21657 | 22580 | - | S4 |
| pfam | HRGMv2_0428_12 | HRGMv2_0428_12_21 | 22610 | 24427 | - | S1 | S1 | S1 | S1 | S1 | S1 |
| TC | HRGMv2_0428_12 | HRGMv2_0428_12_22 | 24638 | 25549 | + | 2.A.4.7.9 |
Gene ID: HRGMv2_0428_12_19
Type: CAZyme
Location: 20290 - 21501 (-)
Type: CAZyme
Location: 20290 - 21501 (-)
Gene ID: HRGMv2_0428_12_20
Type: sulfatase
Location: 21657 - 22580 (-)
Type: sulfatase
Location: 21657 - 22580 (-)
Gene ID: HRGMv2_0428_12_21
Type: pfam
Location: 22610 - 24427 (-)
Type: pfam
Location: 22610 - 24427 (-)
Gene ID: HRGMv2_0428_12_22
Type: TC
Location: 24638 - 25549 (+)
Type: TC
Location: 24638 - 25549 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
UBA940
Species
UBA940 sp900768115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.