Cluster: HRGMv2_0428_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0428
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0428_1 | HRGMv2_0428_1_42 | 43440 | 44558 | - | GT28 |
| TC | HRGMv2_0428_1 | HRGMv2_0428_1_43 | 44566 | 45831 | - | 2.A.103.1.1 |
| pfam | HRGMv2_0428_1 | HRGMv2_0428_1_44 | 45836 | 47176 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_0428_1 | HRGMv2_0428_1_45 | 47177 | 48412 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0428_1_42
Type: CAZyme
Location: 43440 - 44558 (-)
Type: CAZyme
Location: 43440 - 44558 (-)
Gene ID: HRGMv2_0428_1_43
Type: TC
Location: 44566 - 45831 (-)
Type: TC
Location: 44566 - 45831 (-)
Gene ID: HRGMv2_0428_1_44
Type: pfam
Location: 45836 - 47176 (-)
Type: pfam
Location: 45836 - 47176 (-)
Gene ID: HRGMv2_0428_1_45
Type: TC
Location: 47177 - 48412 (-)
Type: TC
Location: 47177 - 48412 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
UBA940
Species
UBA940 sp900768115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.