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Cluster: HRGMv2_0415_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0415_3 HRGMv2_0415_3_67 78443 81385 - GH43_18 | GH51_2
TF HRGMv2_0415_3 HRGMv2_0415_3_68 81528 82148 + GerE
STP HRGMv2_0415_3 HRGMv2_0415_3_69 82239 83228 + FecR
TC HRGMv2_0415_3 HRGMv2_0415_3_70 83372 86686 + 1.B.14.6.1
TC HRGMv2_0415_3 HRGMv2_0415_3_71 86699 88354 + 8.A.46.1.3
pfam HRGMv2_0415_3 HRGMv2_0415_3_72 88431 91544 + FAD_binding_2 | FAD_oxidored | FAD_oxidored | FAD_oxidored | NAD_binding_8
STP HRGMv2_0415_3 HRGMv2_0415_3_73 91621 92502 + PfkB
TC HRGMv2_0415_3 HRGMv2_0415_3_74 92576 93787 - 2.A.1.7.9
TC HRGMv2_0415_3 HRGMv2_0415_3_75 93814 96843 - 2.A.21.9.2
TC HRGMv2_0415_3 HRGMv2_0415_3_76 96931 98091 - 9.B.97.1.2
NULL(UNKNOWN) HRGMv2_0415_3 HRGMv2_0415_3_77 98305 98469 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0415_3 HRGMv2_0415_3_78 98561 99640 + NTP_transferase | ManC_GMP_beta-helix
CAZyme HRGMv2_0415_3 HRGMv2_0415_3_79 99807 100256 - GH73
Gene ID: HRGMv2_0415_3_67
Type: CAZyme
Location: 78443 - 81385 (-)
Gene ID: HRGMv2_0415_3_68
Type: TF
Location: 81528 - 82148 (+)
Gene ID: HRGMv2_0415_3_69
Type: STP
Location: 82239 - 83228 (+)
Gene ID: HRGMv2_0415_3_70
Type: TC
Location: 83372 - 86686 (+)
Gene ID: HRGMv2_0415_3_71
Type: TC
Location: 86699 - 88354 (+)
Gene ID: HRGMv2_0415_3_72
Type: pfam
Location: 88431 - 91544 (+)
Gene ID: HRGMv2_0415_3_73
Type: STP
Location: 91621 - 92502 (+)
Gene ID: HRGMv2_0415_3_74
Type: TC
Location: 92576 - 93787 (-)
Gene ID: HRGMv2_0415_3_75
Type: TC
Location: 93814 - 96843 (-)
Gene ID: HRGMv2_0415_3_76
Type: TC
Location: 96931 - 98091 (-)
Gene ID: HRGMv2_0415_3_77
Type:
Location: 98305 - 98469 (-)
Gene ID: HRGMv2_0415_3_78
Type: pfam
Location: 98561 - 99640 (+)
Gene ID: HRGMv2_0415_3_79
Type: CAZyme
Location: 99807 - 100256 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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