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Cluster: HRGMv2_0415_CGC80

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_101 HRGMv2_0415_101_1 2 1621 + 3.A.1.135.5
CAZyme HRGMv2_0415_101 HRGMv2_0415_101_2 2199 4628 + GH95
pfam HRGMv2_0415_101 HRGMv2_0415_101_3 5189 6391 - Porin_O_P
pfam HRGMv2_0415_101 HRGMv2_0415_101_4 6431 7108 - PhoU | PhoU
TC HRGMv2_0415_101 HRGMv2_0415_101_5 7211 7963 - 3.A.1.7.1
TC HRGMv2_0415_101 HRGMv2_0415_101_6 7975 8829 - 3.A.1.7.2
TC HRGMv2_0415_101 HRGMv2_0415_101_7 8838 10028 - 3.A.1.7.5
Gene ID: HRGMv2_0415_101_1
Type: TC
Location: 2 - 1621 (+)
Gene ID: HRGMv2_0415_101_2
Type: CAZyme
Location: 2199 - 4628 (+)
Gene ID: HRGMv2_0415_101_3
Type: pfam
Location: 5189 - 6391 (-)
Gene ID: HRGMv2_0415_101_4
Type: pfam
Location: 6431 - 7108 (-)
Gene ID: HRGMv2_0415_101_5
Type: TC
Location: 7211 - 7963 (-)
Gene ID: HRGMv2_0415_101_6
Type: TC
Location: 7975 - 8829 (-)
Gene ID: HRGMv2_0415_101_7
Type: TC
Location: 8838 - 10028 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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