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Cluster: HRGMv2_0415_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_64 HRGMv2_0415_64_9 10644 12584 + 3.A.3.6.10
CAZyme HRGMv2_0415_64 HRGMv2_0415_64_10 12622 14439 - GH43
NULL(UNKNOWN) HRGMv2_0415_64 HRGMv2_0415_64_11 14457 15320 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0415_64 HRGMv2_0415_64_12 16129 16614 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0415_64 HRGMv2_0415_64_13 16782 19688 - GH2
pfam HRGMv2_0415_64 HRGMv2_0415_64_14 19702 21156 - Trehalase
pfam HRGMv2_0415_64 HRGMv2_0415_64_15 21252 22919 - SusD_RagB | SusD-like_3
TC HRGMv2_0415_64 HRGMv2_0415_64_16 22943 26149 - 1.B.14.6.1
Gene ID: HRGMv2_0415_64_9
Type: TC
Location: 10644 - 12584 (+)
Gene ID: HRGMv2_0415_64_10
Type: CAZyme
Location: 12622 - 14439 (-)
Gene ID: HRGMv2_0415_64_11
Type:
Location: 14457 - 15320 (+)
Gene ID: HRGMv2_0415_64_12
Type:
Location: 16129 - 16614 (+)
Gene ID: HRGMv2_0415_64_13
Type: CAZyme
Location: 16782 - 19688 (-)
Gene ID: HRGMv2_0415_64_14
Type: pfam
Location: 19702 - 21156 (-)
Gene ID: HRGMv2_0415_64_15
Type: pfam
Location: 21252 - 22919 (-)
Gene ID: HRGMv2_0415_64_16
Type: TC
Location: 22943 - 26149 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0415_64_14 vegetarian > omnivore 1.19474 0.00065
HRGMv2_0415_64_15 vegetarian > omnivore 1.01716 0.00065

🧭 Explore Read Mapping of CGC

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