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Cluster: HRGMv2_0415_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_61 HRGMv2_0415_61_14 15818 16489 + 2.A.115.2.8
STP HRGMv2_0415_61 HRGMv2_0415_61_15 16659 17093 + Sigma70_r4
STP HRGMv2_0415_61 HRGMv2_0415_61_16 17152 18315 + FecR
TC HRGMv2_0415_61 HRGMv2_0415_61_17 18477 21863 + 1.B.14.6.1
TC HRGMv2_0415_61 HRGMv2_0415_61_18 21882 23597 + 8.A.46.1.6
CAZyme HRGMv2_0415_61 HRGMv2_0415_61_19 23660 24775 + GH105
Gene ID: HRGMv2_0415_61_14
Type: TC
Location: 15818 - 16489 (+)
Gene ID: HRGMv2_0415_61_15
Type: STP
Location: 16659 - 17093 (+)
Gene ID: HRGMv2_0415_61_16
Type: STP
Location: 17152 - 18315 (+)
Gene ID: HRGMv2_0415_61_17
Type: TC
Location: 18477 - 21863 (+)
Gene ID: HRGMv2_0415_61_18
Type: TC
Location: 21882 - 23597 (+)
Gene ID: HRGMv2_0415_61_19
Type: CAZyme
Location: 23660 - 24775 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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