dbCAN Logo

Cluster: HRGMv2_0415_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_53 HRGMv2_0415_53_20 22259 23551 - 9.B.106.3.3
STP HRGMv2_0415_53 HRGMv2_0415_53_21 23568 24293 - FHA
TC HRGMv2_0415_53 HRGMv2_0415_53_22 24429 25751 - 2.A.66.1.28
pfam HRGMv2_0415_53 HRGMv2_0415_53_23 25856 26311 - Asp_decarbox
pfam HRGMv2_0415_53 HRGMv2_0415_53_24 26366 27205 - Pantoate_ligase
CAZyme HRGMv2_0415_53 HRGMv2_0415_53_25 27254 28123 + GT5
pfam HRGMv2_0415_53 HRGMv2_0415_53_26 28135 29511 + DUF4270
CAZyme HRGMv2_0415_53 HRGMv2_0415_53_27 29592 30899 - GH57
CAZyme HRGMv2_0415_53 HRGMv2_0415_53_28 30917 32185 - GT4
CAZyme HRGMv2_0415_53 HRGMv2_0415_53_29 32200 32718 - GH133
Gene ID: HRGMv2_0415_53_20
Type: TC
Location: 22259 - 23551 (-)
Gene ID: HRGMv2_0415_53_21
Type: STP
Location: 23568 - 24293 (-)
Gene ID: HRGMv2_0415_53_22
Type: TC
Location: 24429 - 25751 (-)
Gene ID: HRGMv2_0415_53_23
Type: pfam
Location: 25856 - 26311 (-)
Gene ID: HRGMv2_0415_53_24
Type: pfam
Location: 26366 - 27205 (-)
Gene ID: HRGMv2_0415_53_25
Type: CAZyme
Location: 27254 - 28123 (+)
Gene ID: HRGMv2_0415_53_26
Type: pfam
Location: 28135 - 29511 (+)
Gene ID: HRGMv2_0415_53_27
Type: CAZyme
Location: 29592 - 30899 (-)
Gene ID: HRGMv2_0415_53_28
Type: CAZyme
Location: 30917 - 32185 (-)
Gene ID: HRGMv2_0415_53_29
Type: CAZyme
Location: 32200 - 32718 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List