Cluster: HRGMv2_0415_CGC60
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0415
- CGC Family ID: CGCFAM_00111
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0415_46 | HRGMv2_0415_46_9 | 7213 | 9504 | - | GH140 |
| sulfatase | HRGMv2_0415_46 | HRGMv2_0415_46_10 | 9508 | 10431 | - | S1_17 |
| TC | HRGMv2_0415_46 | HRGMv2_0415_46_11 | 10532 | 12253 | - | 8.A.46.1.6 |
| TC | HRGMv2_0415_46 | HRGMv2_0415_46_12 | 12268 | 15552 | - | 1.B.14.6.1 |
| STP | HRGMv2_0415_46 | HRGMv2_0415_46_13 | 15708 | 16688 | - | FecR |
| TF | HRGMv2_0415_46 | HRGMv2_0415_46_14 | 16755 | 17327 | - | GerE |
| CAZyme | HRGMv2_0415_46 | HRGMv2_0415_46_15 | 17395 | 19680 | - | GH106 |
Gene ID: HRGMv2_0415_46_9
Type: CAZyme
Location: 7213 - 9504 (-)
Type: CAZyme
Location: 7213 - 9504 (-)
Gene ID: HRGMv2_0415_46_10
Type: sulfatase
Location: 9508 - 10431 (-)
Type: sulfatase
Location: 9508 - 10431 (-)
Gene ID: HRGMv2_0415_46_11
Type: TC
Location: 10532 - 12253 (-)
Type: TC
Location: 10532 - 12253 (-)
Gene ID: HRGMv2_0415_46_12
Type: TC
Location: 12268 - 15552 (-)
Type: TC
Location: 12268 - 15552 (-)
Gene ID: HRGMv2_0415_46_13
Type: STP
Location: 15708 - 16688 (-)
Type: STP
Location: 15708 - 16688 (-)
Gene ID: HRGMv2_0415_46_14
Type: TF
Location: 16755 - 17327 (-)
Type: TF
Location: 16755 - 17327 (-)
Gene ID: HRGMv2_0415_46_15
Type: CAZyme
Location: 17395 - 19680 (-)
Type: CAZyme
Location: 17395 - 19680 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900760525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.