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Cluster: HRGMv2_0415_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0415_2 HRGMv2_0415_2_60 72201 73193 + GT2
pfam HRGMv2_0415_2 HRGMv2_0415_2_61 73190 74191 + Acyl_transf_3
pfam HRGMv2_0415_2 HRGMv2_0415_2_62 74194 74760 + Hexapep
CAZyme HRGMv2_0415_2 HRGMv2_0415_2_63 74762 75973 + GT4
NULL(UNKNOWN) HRGMv2_0415_2 HRGMv2_0415_2_64 75978 77285 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0415_2 HRGMv2_0415_2_65 77294 78265 + GT2
pfam HRGMv2_0415_2 HRGMv2_0415_2_66 78272 79405 + PS_pyruv_trans
STP HRGMv2_0415_2 HRGMv2_0415_2_67 79407 80624 + Fer4
CAZyme HRGMv2_0415_2 HRGMv2_0415_2_68 80733 81845 + GT4
TC HRGMv2_0415_2 HRGMv2_0415_2_69 81861 82469 + 9.B.18.1.3
Gene ID: HRGMv2_0415_2_60
Type: CAZyme
Location: 72201 - 73193 (+)
Gene ID: HRGMv2_0415_2_61
Type: pfam
Location: 73190 - 74191 (+)
Gene ID: HRGMv2_0415_2_62
Type: pfam
Location: 74194 - 74760 (+)
Gene ID: HRGMv2_0415_2_63
Type: CAZyme
Location: 74762 - 75973 (+)
Gene ID: HRGMv2_0415_2_64
Type:
Location: 75978 - 77285 (+)
Gene ID: HRGMv2_0415_2_65
Type: CAZyme
Location: 77294 - 78265 (+)
Gene ID: HRGMv2_0415_2_66
Type: pfam
Location: 78272 - 79405 (+)
Gene ID: HRGMv2_0415_2_67
Type: STP
Location: 79407 - 80624 (+)
Gene ID: HRGMv2_0415_2_68
Type: CAZyme
Location: 80733 - 81845 (+)
Gene ID: HRGMv2_0415_2_69
Type: TC
Location: 81861 - 82469 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0415_2_69 vegetarian > vegan 1.58855 0.00241

🧭 Explore Read Mapping of CGC

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