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Cluster: HRGMv2_0415_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0415_40 HRGMv2_0415_40_1 126 2465 - GT51
pfam HRGMv2_0415_40 HRGMv2_0415_40_2 2914 5283 + FtsX | FtsX | MacB_PCD
pfam HRGMv2_0415_40 HRGMv2_0415_40_3 5298 7664 + FtsX | FtsX | MacB_PCD
TC HRGMv2_0415_40 HRGMv2_0415_40_4 7683 8363 + 3.A.1.122.14
sulfatase HRGMv2_0415_40 HRGMv2_0415_40_5 8462 9403 + S1_62
pfam HRGMv2_0415_40 HRGMv2_0415_40_6 9519 9947 - HIT
TC HRGMv2_0415_40 HRGMv2_0415_40_7 10100 11371 + 9.A.40.2.4
STP HRGMv2_0415_40 HRGMv2_0415_40_8 11386 12072 - TrkA_C
TC HRGMv2_0415_40 HRGMv2_0415_40_9 12088 13908 - 2.A.38.4.2
Gene ID: HRGMv2_0415_40_1
Type: CAZyme
Location: 126 - 2465 (-)
Gene ID: HRGMv2_0415_40_2
Type: pfam
Location: 2914 - 5283 (+)
Gene ID: HRGMv2_0415_40_3
Type: pfam
Location: 5298 - 7664 (+)
Gene ID: HRGMv2_0415_40_4
Type: TC
Location: 7683 - 8363 (+)
Gene ID: HRGMv2_0415_40_5
Type: sulfatase
Location: 8462 - 9403 (+)
Gene ID: HRGMv2_0415_40_6
Type: pfam
Location: 9519 - 9947 (-)
Gene ID: HRGMv2_0415_40_7
Type: TC
Location: 10100 - 11371 (+)
Gene ID: HRGMv2_0415_40_8
Type: STP
Location: 11386 - 12072 (-)
Gene ID: HRGMv2_0415_40_9
Type: TC
Location: 12088 - 13908 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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