Cluster: HRGMv2_0415_CGC47
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0415
- CGC Family ID: CGCFAM_02659
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0415_29 | HRGMv2_0415_29_6 | 2626 | 3387 | + | GT2 |
| TF | HRGMv2_0415_29 | HRGMv2_0415_29_7 | 3445 | 4872 | + | 0040266 |
| NULL(UNKNOWN) | HRGMv2_0415_29 | HRGMv2_0415_29_8 | 4920 | 5099 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0415_29 | HRGMv2_0415_29_9 | 5125 | 7644 | + | 9.B.144.1.4 |
| pfam | HRGMv2_0415_29 | HRGMv2_0415_29_10 | 7649 | 8911 | - | AAA_14 | DUF4143 |
| CAZyme | HRGMv2_0415_29 | HRGMv2_0415_29_11 | 9027 | 10025 | - | GT2 |
Gene ID: HRGMv2_0415_29_6
Type: CAZyme
Location: 2626 - 3387 (+)
Type: CAZyme
Location: 2626 - 3387 (+)
Gene ID: HRGMv2_0415_29_7
Type: TF
Location: 3445 - 4872 (+)
Type: TF
Location: 3445 - 4872 (+)
Gene ID: HRGMv2_0415_29_8
Type:
Location: 4920 - 5099 (+)
Type:
Location: 4920 - 5099 (+)
Gene ID: HRGMv2_0415_29_9
Type: TC
Location: 5125 - 7644 (+)
Type: TC
Location: 5125 - 7644 (+)
Gene ID: HRGMv2_0415_29_10
Type: pfam
Location: 7649 - 8911 (-)
Type: pfam
Location: 7649 - 8911 (-)
Gene ID: HRGMv2_0415_29_11
Type: CAZyme
Location: 9027 - 10025 (-)
Type: CAZyme
Location: 9027 - 10025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900760525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.