Cluster: HRGMv2_0415_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0415
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0415_1 | HRGMv2_0415_1_124 | 166348 | 167220 | - | 2.A.7.30.1 |
| NULL(UNKNOWN) | HRGMv2_0415_1 | HRGMv2_0415_1_125 | 167412 | 167888 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_0415_1 | HRGMv2_0415_1_126 | 168011 | 168565 | + | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | HRGMv2_0415_1 | HRGMv2_0415_1_127 | 168668 | 170758 | + | GH42 |
Gene ID: HRGMv2_0415_1_124
Type: TC
Location: 166348 - 167220 (-)
Type: TC
Location: 166348 - 167220 (-)
Gene ID: HRGMv2_0415_1_125
Type:
Location: 167412 - 167888 (+)
Type:
Location: 167412 - 167888 (+)
Gene ID: HRGMv2_0415_1_126
Type: STP
Location: 168011 - 168565 (+)
Type: STP
Location: 168011 - 168565 (+)
Gene ID: HRGMv2_0415_1_127
Type: CAZyme
Location: 168668 - 170758 (+)
Type: CAZyme
Location: 168668 - 170758 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900760525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.