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Cluster: HRGMv2_0415_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_20 HRGMv2_0415_20_4 2005 5307 + 1.B.14.6.1
TC HRGMv2_0415_20 HRGMv2_0415_20_5 5327 6934 + 8.A.46.1.6
NULL(UNKNOWN) HRGMv2_0415_20 HRGMv2_0415_20_6 6928 8685 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0415_20 HRGMv2_0415_20_7 8696 9814 + GH105
STP HRGMv2_0415_20 HRGMv2_0415_20_8 9914 11158 + EPSP_synthase
NULL(UNKNOWN) HRGMv2_0415_20 HRGMv2_0415_20_9 11236 11658 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0415_20 HRGMv2_0415_20_10 11703 12506 + 3.A.1.15.6
Gene ID: HRGMv2_0415_20_4
Type: TC
Location: 2005 - 5307 (+)
Gene ID: HRGMv2_0415_20_5
Type: TC
Location: 5327 - 6934 (+)
Gene ID: HRGMv2_0415_20_6
Type:
Location: 6928 - 8685 (+)
Gene ID: HRGMv2_0415_20_7
Type: CAZyme
Location: 8696 - 9814 (+)
Gene ID: HRGMv2_0415_20_8
Type: STP
Location: 9914 - 11158 (+)
Gene ID: HRGMv2_0415_20_9
Type:
Location: 11236 - 11658 (+)
Gene ID: HRGMv2_0415_20_10
Type: TC
Location: 11703 - 12506 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0415_20_7 vegan > omnivore 1.07623 0.02765
HRGMv2_0415_20_7 vegetarian > omnivore 1.13199 0.00065

🧭 Explore Read Mapping of CGC

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