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Cluster: HRGMv2_0415_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_16 HRGMv2_0415_16_41 46326 47792 - 2.A.21.3.10
pfam HRGMv2_0415_16 HRGMv2_0415_16_42 47955 48389 + ABM
pfam HRGMv2_0415_16 HRGMv2_0415_16_43 48729 50042 - SpoIID
TC HRGMv2_0415_16 HRGMv2_0415_16_44 50051 52045 - 2.A.67.4.2
TC HRGMv2_0415_16 HRGMv2_0415_16_45 52796 54157 - 2.A.6.2.46
TC HRGMv2_0415_16 HRGMv2_0415_16_46 54154 57339 - 2.A.6.2.22
TC HRGMv2_0415_16 HRGMv2_0415_16_47 57349 58455 - 2.A.6.2.22
TF HRGMv2_0415_16 HRGMv2_0415_16_48 58589 59428 + HTH_AraC
pfam HRGMv2_0415_16 HRGMv2_0415_16_49 59715 60338 + Toprim | RecR_ZnF | Toprim_4 | RecR_C | RecR_HhH
CAZyme HRGMv2_0415_16 HRGMv2_0415_16_50 60370 61539 + GT2
Gene ID: HRGMv2_0415_16_41
Type: TC
Location: 46326 - 47792 (-)
Gene ID: HRGMv2_0415_16_42
Type: pfam
Location: 47955 - 48389 (+)
Gene ID: HRGMv2_0415_16_43
Type: pfam
Location: 48729 - 50042 (-)
Gene ID: HRGMv2_0415_16_44
Type: TC
Location: 50051 - 52045 (-)
Gene ID: HRGMv2_0415_16_45
Type: TC
Location: 52796 - 54157 (-)
Gene ID: HRGMv2_0415_16_46
Type: TC
Location: 54154 - 57339 (-)
Gene ID: HRGMv2_0415_16_47
Type: TC
Location: 57349 - 58455 (-)
Gene ID: HRGMv2_0415_16_48
Type: TF
Location: 58589 - 59428 (+)
Gene ID: HRGMv2_0415_16_49
Type: pfam
Location: 59715 - 60338 (+)
Gene ID: HRGMv2_0415_16_50
Type: CAZyme
Location: 60370 - 61539 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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