dbCAN Logo

Cluster: HRGMv2_0415_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_13 HRGMv2_0415_13_29 39942 41654 + 3.A.3.7.2
TC HRGMv2_0415_13 HRGMv2_0415_13_30 41692 43734 + 3.A.3.7.2
TC HRGMv2_0415_13 HRGMv2_0415_13_31 43851 44432 + 3.A.3.7.2
NULL(UNKNOWN) HRGMv2_0415_13 HRGMv2_0415_13_32 44453 45208 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0415_13 HRGMv2_0415_13_33 45225 46346 + KdpD
TC HRGMv2_0415_13 HRGMv2_0415_13_34 46351 48081 + 2.A.21.9.1
pfam HRGMv2_0415_13 HRGMv2_0415_13_35 48111 49451 + AA_kinase | ACT_9
TC HRGMv2_0415_13 HRGMv2_0415_13_36 49515 50828 - 2.A.13.1.3
CAZyme HRGMv2_0415_13 HRGMv2_0415_13_37 50915 53419 + GH2
Gene ID: HRGMv2_0415_13_29
Type: TC
Location: 39942 - 41654 (+)
Gene ID: HRGMv2_0415_13_30
Type: TC
Location: 41692 - 43734 (+)
Gene ID: HRGMv2_0415_13_31
Type: TC
Location: 43851 - 44432 (+)
Gene ID: HRGMv2_0415_13_32
Type:
Location: 44453 - 45208 (+)
Gene ID: HRGMv2_0415_13_33
Type: pfam
Location: 45225 - 46346 (+)
Gene ID: HRGMv2_0415_13_34
Type: TC
Location: 46351 - 48081 (+)
Gene ID: HRGMv2_0415_13_35
Type: pfam
Location: 48111 - 49451 (+)
Gene ID: HRGMv2_0415_13_36
Type: TC
Location: 49515 - 50828 (-)
Gene ID: HRGMv2_0415_13_37
Type: CAZyme
Location: 50915 - 53419 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List