dbCAN Logo

Cluster: HRGMv2_0415_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0415_4 HRGMv2_0415_4_26 35036 38305 + 1.B.14.6.1
TC HRGMv2_0415_4 HRGMv2_0415_4_27 38350 40047 + 8.A.46.1.6
CAZyme HRGMv2_0415_4 HRGMv2_0415_4_28 40133 42691 + GH2
CAZyme HRGMv2_0415_4 HRGMv2_0415_4_29 42717 44171 + GH43_2
pfam HRGMv2_0415_4 HRGMv2_0415_4_30 44211 44816 - Bac_DNA_binding | HU-HIG
CAZyme HRGMv2_0415_4 HRGMv2_0415_4_31 45414 47408 + GH38
CAZyme HRGMv2_0415_4 HRGMv2_0415_4_32 47425 49884 + GH35
CAZyme HRGMv2_0415_4 HRGMv2_0415_4_33 49899 51482 + CBM91 | GH43_10
CAZyme HRGMv2_0415_4 HRGMv2_0415_4_34 51511 53751 + GH182
NULL(UNKNOWN) HRGMv2_0415_4 HRGMv2_0415_4_35 53763 56066 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0415_4 HRGMv2_0415_4_36 56087 57799 + CBM32 | GH43_28
Gene ID: HRGMv2_0415_4_26
Type: TC
Location: 35036 - 38305 (+)
Gene ID: HRGMv2_0415_4_27
Type: TC
Location: 38350 - 40047 (+)
Gene ID: HRGMv2_0415_4_28
Type: CAZyme
Location: 40133 - 42691 (+)
Gene ID: HRGMv2_0415_4_29
Type: CAZyme
Location: 42717 - 44171 (+)
Gene ID: HRGMv2_0415_4_30
Type: pfam
Location: 44211 - 44816 (-)
Gene ID: HRGMv2_0415_4_31
Type: CAZyme
Location: 45414 - 47408 (+)
Gene ID: HRGMv2_0415_4_32
Type: CAZyme
Location: 47425 - 49884 (+)
Gene ID: HRGMv2_0415_4_33
Type: CAZyme
Location: 49899 - 51482 (+)
Gene ID: HRGMv2_0415_4_34
Type: CAZyme
Location: 51511 - 53751 (+)
Gene ID: HRGMv2_0415_4_35
Type:
Location: 53763 - 56066 (+)
Gene ID: HRGMv2_0415_4_36
Type: CAZyme
Location: 56087 - 57799 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List