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Cluster: HRGMv2_0413_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0413_4 HRGMv2_0413_4_8 10321 13437 + 1.B.14.6.1
sulfatase HRGMv2_0413_4 HRGMv2_0413_4_9 13463 15082 + S1_27
CAZyme HRGMv2_0413_4 HRGMv2_0413_4_10 15106 16803 + CE1
CAZyme HRGMv2_0413_4 HRGMv2_0413_4_11 16995 17876 + CE1
CAZyme HRGMv2_0413_4 HRGMv2_0413_4_12 17925 19097 + CE1
CAZyme HRGMv2_0413_4 HRGMv2_0413_4_13 19094 21433 + GH3
CAZyme HRGMv2_0413_4 HRGMv2_0413_4_14 21530 23383 - GH128
Gene ID: HRGMv2_0413_4_8
Type: TC
Location: 10321 - 13437 (+)
Gene ID: HRGMv2_0413_4_9
Type: sulfatase
Location: 13463 - 15082 (+)
Gene ID: HRGMv2_0413_4_10
Type: CAZyme
Location: 15106 - 16803 (+)
Gene ID: HRGMv2_0413_4_11
Type: CAZyme
Location: 16995 - 17876 (+)
Gene ID: HRGMv2_0413_4_12
Type: CAZyme
Location: 17925 - 19097 (+)
Gene ID: HRGMv2_0413_4_13
Type: CAZyme
Location: 19094 - 21433 (+)
Gene ID: HRGMv2_0413_4_14
Type: CAZyme
Location: 21530 - 23383 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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