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Cluster: HRGMv2_0413_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0413_3 HRGMv2_0413_3_68 93890 96955 + 1.B.14.6.1
pfam HRGMv2_0413_3 HRGMv2_0413_3_69 96982 98496 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0413_3 HRGMv2_0413_3_70 98772 99974 + GH144
CAZyme HRGMv2_0413_3 HRGMv2_0413_3_71 99995 102316 + GH3
CAZyme HRGMv2_0413_3 HRGMv2_0413_3_72 102732 105557 + GH29
pfam HRGMv2_0413_3 HRGMv2_0413_3_73 105956 107275 + OEP | OEP
TC HRGMv2_0413_3 HRGMv2_0413_3_74 107272 108306 + 8.A.1.1.2
Gene ID: HRGMv2_0413_3_68
Type: TC
Location: 93890 - 96955 (+)
Gene ID: HRGMv2_0413_3_69
Type: pfam
Location: 96982 - 98496 (+)
Gene ID: HRGMv2_0413_3_70
Type: CAZyme
Location: 98772 - 99974 (+)
Gene ID: HRGMv2_0413_3_71
Type: CAZyme
Location: 99995 - 102316 (+)
Gene ID: HRGMv2_0413_3_72
Type: CAZyme
Location: 102732 - 105557 (+)
Gene ID: HRGMv2_0413_3_73
Type: pfam
Location: 105956 - 107275 (+)
Gene ID: HRGMv2_0413_3_74
Type: TC
Location: 107272 - 108306 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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