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Cluster: HRGMv2_0413_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0413_68 HRGMv2_0413_68_1 80 1600 + 1.B.14.6.1
TC HRGMv2_0413_68 HRGMv2_0413_68_2 1645 3246 + 8.A.46.1.3
CAZyme HRGMv2_0413_68 HRGMv2_0413_68_3 3260 4855 + GH30_4
CAZyme HRGMv2_0413_68 HRGMv2_0413_68_4 4877 7285 + GH2
NULL(UNKNOWN) HRGMv2_0413_68 HRGMv2_0413_68_5 7344 8216 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0413_68 HRGMv2_0413_68_6 8412 13139 + GH53
Gene ID: HRGMv2_0413_68_1
Type: TC
Location: 80 - 1600 (+)
Gene ID: HRGMv2_0413_68_2
Type: TC
Location: 1645 - 3246 (+)
Gene ID: HRGMv2_0413_68_3
Type: CAZyme
Location: 3260 - 4855 (+)
Gene ID: HRGMv2_0413_68_4
Type: CAZyme
Location: 4877 - 7285 (+)
Gene ID: HRGMv2_0413_68_5
Type:
Location: 7344 - 8216 (+)
Gene ID: HRGMv2_0413_68_6
Type: CAZyme
Location: 8412 - 13139 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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