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Cluster: HRGMv2_0413_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0413_48 HRGMv2_0413_48_3 4867 6888 - GH97
pfam HRGMv2_0413_48 HRGMv2_0413_48_4 6963 8798 - SusD_RagB | SusD-like_3
TC HRGMv2_0413_48 HRGMv2_0413_48_5 8853 11969 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0413_48 HRGMv2_0413_48_6 12385 13293 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0413_48 HRGMv2_0413_48_7 13755 15710 + GH87
pfam HRGMv2_0413_48 HRGMv2_0413_48_8 15967 17658 + DUF6377
CAZyme HRGMv2_0413_48 HRGMv2_0413_48_9 18124 20436 - CBM35
pfam HRGMv2_0413_48 HRGMv2_0413_48_10 20729 21028 - Thioredoxin | AhpC-TSA | Thioredoxin_2 | TraF
pfam HRGMv2_0413_48 HRGMv2_0413_48_11 21120 22007 + DHDPS
TC HRGMv2_0413_48 HRGMv2_0413_48_12 22345 23016 + 2.A.115.2.8
Gene ID: HRGMv2_0413_48_3
Type: CAZyme
Location: 4867 - 6888 (-)
Gene ID: HRGMv2_0413_48_4
Type: pfam
Location: 6963 - 8798 (-)
Gene ID: HRGMv2_0413_48_5
Type: TC
Location: 8853 - 11969 (-)
Gene ID: HRGMv2_0413_48_6
Type:
Location: 12385 - 13293 (-)
Gene ID: HRGMv2_0413_48_7
Type: CAZyme
Location: 13755 - 15710 (+)
Gene ID: HRGMv2_0413_48_8
Type: pfam
Location: 15967 - 17658 (+)
Gene ID: HRGMv2_0413_48_9
Type: CAZyme
Location: 18124 - 20436 (-)
Gene ID: HRGMv2_0413_48_10
Type: pfam
Location: 20729 - 21028 (-)
Gene ID: HRGMv2_0413_48_11
Type: pfam
Location: 21120 - 22007 (+)
Gene ID: HRGMv2_0413_48_12
Type: TC
Location: 22345 - 23016 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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