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Cluster: HRGMv2_0413_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0413_45 HRGMv2_0413_45_1 69 2186 - GH13_14
pfam HRGMv2_0413_45 HRGMv2_0413_45_2 2300 2797 - AhpC-TSA | Redoxin
TC HRGMv2_0413_45 HRGMv2_0413_45_3 3162 5783 + 3.A.11.3.1
TC HRGMv2_0413_45 HRGMv2_0413_45_4 5816 6922 - 3.A.1.105.4
TC HRGMv2_0413_45 HRGMv2_0413_45_5 6924 7973 - 3.A.1.105.4
TC HRGMv2_0413_45 HRGMv2_0413_45_6 7978 8733 - 3.A.1.105.15
TC HRGMv2_0413_45 HRGMv2_0413_45_7 8742 9647 - 3.A.1.105.15
Gene ID: HRGMv2_0413_45_1
Type: CAZyme
Location: 69 - 2186 (-)
Gene ID: HRGMv2_0413_45_2
Type: pfam
Location: 2300 - 2797 (-)
Gene ID: HRGMv2_0413_45_3
Type: TC
Location: 3162 - 5783 (+)
Gene ID: HRGMv2_0413_45_4
Type: TC
Location: 5816 - 6922 (-)
Gene ID: HRGMv2_0413_45_5
Type: TC
Location: 6924 - 7973 (-)
Gene ID: HRGMv2_0413_45_6
Type: TC
Location: 7978 - 8733 (-)
Gene ID: HRGMv2_0413_45_7
Type: TC
Location: 8742 - 9647 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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