dbCAN Logo

Cluster: HRGMv2_0413_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0413_41 HRGMv2_0413_41_2 3258 5096 + GH32
TC HRGMv2_0413_41 HRGMv2_0413_41_3 5117 6301 + 2.A.1.7.17
STP HRGMv2_0413_41 HRGMv2_0413_41_4 6382 7239 + PfkB
CAZyme HRGMv2_0413_41 HRGMv2_0413_41_5 7342 9588 - GH13_28
NULL(UNKNOWN) HRGMv2_0413_41 HRGMv2_0413_41_6 9837 11801 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0413_41 HRGMv2_0413_41_7 11821 13344 - SusD_RagB | SusD-like_3
TC HRGMv2_0413_41 HRGMv2_0413_41_8 13366 16521 - 1.B.14.6.1
CAZyme HRGMv2_0413_41 HRGMv2_0413_41_9 16794 18182 - GH16_3
STP HRGMv2_0413_41 HRGMv2_0413_41_10 18422 20452 + HATPase_c
pfam HRGMv2_0413_41 HRGMv2_0413_41_11 20630 21067 + CTP_transf_like
TC HRGMv2_0413_41 HRGMv2_0413_41_12 21147 22763 + 9.B.174.1.2
TC HRGMv2_0413_41 HRGMv2_0413_41_13 22769 24064 + 9.A.40.2.4
Gene ID: HRGMv2_0413_41_2
Type: CAZyme
Location: 3258 - 5096 (+)
Gene ID: HRGMv2_0413_41_3
Type: TC
Location: 5117 - 6301 (+)
Gene ID: HRGMv2_0413_41_4
Type: STP
Location: 6382 - 7239 (+)
Gene ID: HRGMv2_0413_41_5
Type: CAZyme
Location: 7342 - 9588 (-)
Gene ID: HRGMv2_0413_41_6
Type:
Location: 9837 - 11801 (-)
Gene ID: HRGMv2_0413_41_7
Type: pfam
Location: 11821 - 13344 (-)
Gene ID: HRGMv2_0413_41_8
Type: TC
Location: 13366 - 16521 (-)
Gene ID: HRGMv2_0413_41_9
Type: CAZyme
Location: 16794 - 18182 (-)
Gene ID: HRGMv2_0413_41_10
Type: STP
Location: 18422 - 20452 (+)
Gene ID: HRGMv2_0413_41_11
Type: pfam
Location: 20630 - 21067 (+)
Gene ID: HRGMv2_0413_41_12
Type: TC
Location: 21147 - 22763 (+)
Gene ID: HRGMv2_0413_41_13
Type: TC
Location: 22769 - 24064 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List