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Cluster: HRGMv2_0413_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0413_39 HRGMv2_0413_39_5 6549 10082 - CBM13 | CBM13 | CBM13
TC HRGMv2_0413_39 HRGMv2_0413_39_6 10253 11719 - 3.D.1.5.1
TC HRGMv2_0413_39 HRGMv2_0413_39_7 11739 13232 - 3.D.1.5.1
TC HRGMv2_0413_39 HRGMv2_0413_39_8 13310 15337 - 3.D.9.1.1
TC HRGMv2_0413_39 HRGMv2_0413_39_9 15346 15657 - 3.D.1.2.1
TC HRGMv2_0413_39 HRGMv2_0413_39_10 15671 16186 - 3.D.9.1.1
STP HRGMv2_0413_39 HRGMv2_0413_39_11 16228 16983 - Fer4 | Fer4
TC HRGMv2_0413_39 HRGMv2_0413_39_12 17053 17937 - 3.A.2.1.1
TC HRGMv2_0413_39 HRGMv2_0413_39_13 18046 19620 - 3.A.2.1.3
Gene ID: HRGMv2_0413_39_5
Type: CAZyme
Location: 6549 - 10082 (-)
Gene ID: HRGMv2_0413_39_6
Type: TC
Location: 10253 - 11719 (-)
Gene ID: HRGMv2_0413_39_7
Type: TC
Location: 11739 - 13232 (-)
Gene ID: HRGMv2_0413_39_8
Type: TC
Location: 13310 - 15337 (-)
Gene ID: HRGMv2_0413_39_9
Type: TC
Location: 15346 - 15657 (-)
Gene ID: HRGMv2_0413_39_10
Type: TC
Location: 15671 - 16186 (-)
Gene ID: HRGMv2_0413_39_11
Type: STP
Location: 16228 - 16983 (-)
Gene ID: HRGMv2_0413_39_12
Type: TC
Location: 17053 - 17937 (-)
Gene ID: HRGMv2_0413_39_13
Type: TC
Location: 18046 - 19620 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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