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Cluster: HRGMv2_0413_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0413_32 HRGMv2_0413_32_2 4938 6536 + 1.A.23.4.5
NULL(UNKNOWN) HRGMv2_0413_32 HRGMv2_0413_32_3 6908 10501 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0413_32 HRGMv2_0413_32_4 11896 13893 - GH97
NULL(UNKNOWN) HRGMv2_0413_32 HRGMv2_0413_32_5 13890 14285 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0413_32 HRGMv2_0413_32_6 14317 15702 - GH27
CAZyme HRGMv2_0413_32 HRGMv2_0413_32_7 15729 18845 - GH27
pfam HRGMv2_0413_32 HRGMv2_0413_32_8 19059 20423 - SusF_SusE
pfam HRGMv2_0413_32 HRGMv2_0413_32_9 20452 22167 - SusF_SusE
TC HRGMv2_0413_32 HRGMv2_0413_32_10 22193 23923 - 8.A.46.1.1
TC HRGMv2_0413_32 HRGMv2_0413_32_11 23957 26932 - 1.B.14.6.1
Gene ID: HRGMv2_0413_32_2
Type: TC
Location: 4938 - 6536 (+)
Gene ID: HRGMv2_0413_32_3
Type:
Location: 6908 - 10501 (+)
Gene ID: HRGMv2_0413_32_4
Type: CAZyme
Location: 11896 - 13893 (-)
Gene ID: HRGMv2_0413_32_5
Type:
Location: 13890 - 14285 (-)
Gene ID: HRGMv2_0413_32_6
Type: CAZyme
Location: 14317 - 15702 (-)
Gene ID: HRGMv2_0413_32_7
Type: CAZyme
Location: 15729 - 18845 (-)
Gene ID: HRGMv2_0413_32_8
Type: pfam
Location: 19059 - 20423 (-)
Gene ID: HRGMv2_0413_32_9
Type: pfam
Location: 20452 - 22167 (-)
Gene ID: HRGMv2_0413_32_10
Type: TC
Location: 22193 - 23923 (-)
Gene ID: HRGMv2_0413_32_11
Type: TC
Location: 23957 - 26932 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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