dbCAN Logo

Cluster: HRGMv2_0413_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0413_6 HRGMv2_0413_6_1 1 1182 + 2.A.6.2.23
TC HRGMv2_0413_6 HRGMv2_0413_6_2 1205 2350 + 2.A.6.2.47
TC HRGMv2_0413_6 HRGMv2_0413_6_3 2384 5608 + 2.A.6.2.16
pfam HRGMv2_0413_6 HRGMv2_0413_6_4 6192 6659 + NDK
CAZyme HRGMv2_0413_6 HRGMv2_0413_6_5 6667 7647 + CBM50
pfam HRGMv2_0413_6 HRGMv2_0413_6_6 7653 8414 + NTP_transferase | NTP_transf_3
TC HRGMv2_0413_6 HRGMv2_0413_6_7 8693 10606 + 1.A.33.1.2
Gene ID: HRGMv2_0413_6_1
Type: TC
Location: 1 - 1182 (+)
Gene ID: HRGMv2_0413_6_2
Type: TC
Location: 1205 - 2350 (+)
Gene ID: HRGMv2_0413_6_3
Type: TC
Location: 2384 - 5608 (+)
Gene ID: HRGMv2_0413_6_4
Type: pfam
Location: 6192 - 6659 (+)
Gene ID: HRGMv2_0413_6_5
Type: CAZyme
Location: 6667 - 7647 (+)
Gene ID: HRGMv2_0413_6_6
Type: pfam
Location: 7653 - 8414 (+)
Gene ID: HRGMv2_0413_6_7
Type: TC
Location: 8693 - 10606 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List