Cluster: HRGMv2_0409_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: beta-glucan
- Genome ID: HRGMv2_0409
- CGC Family ID: CGCFAM_00213
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0409_3 | HRGMv2_0409_3_90 | 98241 | 99761 | - | GH128 |
| CAZyme | HRGMv2_0409_3 | HRGMv2_0409_3_91 | 99770 | 102001 | - | GH3 |
| CAZyme | HRGMv2_0409_3 | HRGMv2_0409_3_92 | 102009 | 102899 | - | GH16_3 |
| CAZyme | HRGMv2_0409_3 | HRGMv2_0409_3_93 | 102963 | 104069 | - | GH16_3 |
| NULL(UNKNOWN) | HRGMv2_0409_3 | HRGMv2_0409_3_94 | 104235 | 105134 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0409_3 | HRGMv2_0409_3_95 | 105235 | 106803 | - | 8.A.46.1.3 |
| TC | HRGMv2_0409_3 | HRGMv2_0409_3_96 | 106825 | 109968 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0409_3_90
Type: CAZyme
Location: 98241 - 99761 (-)
Type: CAZyme
Location: 98241 - 99761 (-)
Gene ID: HRGMv2_0409_3_91
Type: CAZyme
Location: 99770 - 102001 (-)
Type: CAZyme
Location: 99770 - 102001 (-)
Gene ID: HRGMv2_0409_3_92
Type: CAZyme
Location: 102009 - 102899 (-)
Type: CAZyme
Location: 102009 - 102899 (-)
Gene ID: HRGMv2_0409_3_93
Type: CAZyme
Location: 102963 - 104069 (-)
Type: CAZyme
Location: 102963 - 104069 (-)
Gene ID: HRGMv2_0409_3_94
Type:
Location: 104235 - 105134 (-)
Type:
Location: 104235 - 105134 (-)
Gene ID: HRGMv2_0409_3_95
Type: TC
Location: 105235 - 106803 (-)
Type: TC
Location: 105235 - 106803 (-)
Gene ID: HRGMv2_0409_3_96
Type: TC
Location: 106825 - 109968 (-)
Type: TC
Location: 106825 - 109968 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_A
Species
Barnesiella_A excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.