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Cluster: HRGMv2_0409_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0409_33 HRGMv2_0409_33_2 389 2317 - CE17
CAZyme HRGMv2_0409_33 HRGMv2_0409_33_3 2344 4317 - GH97
STP HRGMv2_0409_33 HRGMv2_0409_33_4 4356 7694 - TPR_1
TC HRGMv2_0409_33 HRGMv2_0409_33_5 7713 9098 - 2.A.1.1.55
TF HRGMv2_0409_33 HRGMv2_0409_33_6 9151 10146 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_0409_33 HRGMv2_0409_33_7 10150 13719 - CBM32 | GH38
CAZyme HRGMv2_0409_33 HRGMv2_0409_33_8 13772 16696 - CBM32 | GH2
Gene ID: HRGMv2_0409_33_2
Type: CAZyme
Location: 389 - 2317 (-)
Gene ID: HRGMv2_0409_33_3
Type: CAZyme
Location: 2344 - 4317 (-)
Gene ID: HRGMv2_0409_33_4
Type: STP
Location: 4356 - 7694 (-)
Gene ID: HRGMv2_0409_33_5
Type: TC
Location: 7713 - 9098 (-)
Gene ID: HRGMv2_0409_33_6
Type: TF
Location: 9151 - 10146 (+)
Gene ID: HRGMv2_0409_33_7
Type: CAZyme
Location: 10150 - 13719 (-)
Gene ID: HRGMv2_0409_33_8
Type: CAZyme
Location: 13772 - 16696 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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