Cluster: HRGMv2_0409_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0409
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0409_32 | HRGMv2_0409_32_11 | 8407 | 10047 | + | GT3 |
| CAZyme | HRGMv2_0409_32 | HRGMv2_0409_32_12 | 10074 | 12620 | + | GT35 |
| pfam | HRGMv2_0409_32 | HRGMv2_0409_32_13 | 12926 | 13807 | - | Acyl_transf_1 |
| pfam | HRGMv2_0409_32 | HRGMv2_0409_32_14 | 13942 | 14187 | + | TatA_B_E |
| TC | HRGMv2_0409_32 | HRGMv2_0409_32_15 | 14218 | 15015 | + | 2.A.64.3.2 |
Gene ID: HRGMv2_0409_32_11
Type: CAZyme
Location: 8407 - 10047 (+)
Type: CAZyme
Location: 8407 - 10047 (+)
Gene ID: HRGMv2_0409_32_12
Type: CAZyme
Location: 10074 - 12620 (+)
Type: CAZyme
Location: 10074 - 12620 (+)
Gene ID: HRGMv2_0409_32_13
Type: pfam
Location: 12926 - 13807 (-)
Type: pfam
Location: 12926 - 13807 (-)
Gene ID: HRGMv2_0409_32_14
Type: pfam
Location: 13942 - 14187 (+)
Type: pfam
Location: 13942 - 14187 (+)
Gene ID: HRGMv2_0409_32_15
Type: TC
Location: 14218 - 15015 (+)
Type: TC
Location: 14218 - 15015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_A
Species
Barnesiella_A excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.