Cluster: HRGMv2_0409_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0409
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0409_20 | HRGMv2_0409_20_19 | 28626 | 29879 | + | 9.B.146.1.3 |
| pfam | HRGMv2_0409_20 | HRGMv2_0409_20_20 | 29892 | 31232 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_0409_20 | HRGMv2_0409_20_21 | 31260 | 32591 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_0409_20 | HRGMv2_0409_20_22 | 32601 | 33713 | + | GT28 |
Gene ID: HRGMv2_0409_20_19
Type: TC
Location: 28626 - 29879 (+)
Type: TC
Location: 28626 - 29879 (+)
Gene ID: HRGMv2_0409_20_20
Type: pfam
Location: 29892 - 31232 (+)
Type: pfam
Location: 29892 - 31232 (+)
Gene ID: HRGMv2_0409_20_21
Type: TC
Location: 31260 - 32591 (+)
Type: TC
Location: 31260 - 32591 (+)
Gene ID: HRGMv2_0409_20_22
Type: CAZyme
Location: 32601 - 33713 (+)
Type: CAZyme
Location: 32601 - 33713 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_A
Species
Barnesiella_A excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.