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Cluster: HRGMv2_0409_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0409_1 HRGMv2_0409_1_45 39169 40854 - 3.A.1.120.6
pfam HRGMv2_0409_1 HRGMv2_0409_1_46 40889 41452 - Pep_deformylase
pfam HRGMv2_0409_1 HRGMv2_0409_1_47 41449 41877 - RuvX
CAZyme HRGMv2_0409_1 HRGMv2_0409_1_48 42033 45380 - CE8
TC HRGMv2_0409_1 HRGMv2_0409_1_49 45595 47037 - 3.D.1.8.1
TC HRGMv2_0409_1 HRGMv2_0409_1_50 47050 48540 - 3.D.1.5.1
TC HRGMv2_0409_1 HRGMv2_0409_1_51 48572 50479 - 3.D.9.1.1
TC HRGMv2_0409_1 HRGMv2_0409_1_52 50489 50800 - 3.D.1.2.1
TC HRGMv2_0409_1 HRGMv2_0409_1_53 50811 51320 - 3.D.9.1.1
STP HRGMv2_0409_1 HRGMv2_0409_1_54 51427 51885 - Fer4
TC HRGMv2_0409_1 HRGMv2_0409_1_55 51967 52836 - 3.A.2.1.7
TC HRGMv2_0409_1 HRGMv2_0409_1_56 52846 54423 - 3.A.2.1.3
pfam HRGMv2_0409_1 HRGMv2_0409_1_57 54428 54967 - OSCP
pfam HRGMv2_0409_1 HRGMv2_0409_1_58 54974 55471 - ATP-synt_B | YMF19
TC HRGMv2_0409_1 HRGMv2_0409_1_59 55481 55726 - 3.A.2.1.6
TC HRGMv2_0409_1 HRGMv2_0409_1_60 55768 56859 - 3.A.2.1.7
pfam HRGMv2_0409_1 HRGMv2_0409_1_61 56897 57130 - ATP-synt_DE_N
TC HRGMv2_0409_1 HRGMv2_0409_1_62 57136 58650 - 3.A.2.1.2
TC HRGMv2_0409_1 HRGMv2_0409_1_63 58711 59787 - 3.D.1.5.1
TC HRGMv2_0409_1 HRGMv2_0409_1_64 59821 61449 - 3.D.1.5.1
TC HRGMv2_0409_1 HRGMv2_0409_1_65 61478 62065 - 3.D.1.6.1
TC HRGMv2_0409_1 HRGMv2_0409_1_66 62056 62406 - 3.D.1.8.1
Gene ID: HRGMv2_0409_1_45
Type: TC
Location: 39169 - 40854 (-)
Gene ID: HRGMv2_0409_1_46
Type: pfam
Location: 40889 - 41452 (-)
Gene ID: HRGMv2_0409_1_47
Type: pfam
Location: 41449 - 41877 (-)
Gene ID: HRGMv2_0409_1_48
Type: CAZyme
Location: 42033 - 45380 (-)
Gene ID: HRGMv2_0409_1_49
Type: TC
Location: 45595 - 47037 (-)
Gene ID: HRGMv2_0409_1_50
Type: TC
Location: 47050 - 48540 (-)
Gene ID: HRGMv2_0409_1_51
Type: TC
Location: 48572 - 50479 (-)
Gene ID: HRGMv2_0409_1_52
Type: TC
Location: 50489 - 50800 (-)
Gene ID: HRGMv2_0409_1_53
Type: TC
Location: 50811 - 51320 (-)
Gene ID: HRGMv2_0409_1_54
Type: STP
Location: 51427 - 51885 (-)
Gene ID: HRGMv2_0409_1_55
Type: TC
Location: 51967 - 52836 (-)
Gene ID: HRGMv2_0409_1_56
Type: TC
Location: 52846 - 54423 (-)
Gene ID: HRGMv2_0409_1_57
Type: pfam
Location: 54428 - 54967 (-)
Gene ID: HRGMv2_0409_1_58
Type: pfam
Location: 54974 - 55471 (-)
Gene ID: HRGMv2_0409_1_59
Type: TC
Location: 55481 - 55726 (-)
Gene ID: HRGMv2_0409_1_60
Type: TC
Location: 55768 - 56859 (-)
Gene ID: HRGMv2_0409_1_61
Type: pfam
Location: 56897 - 57130 (-)
Gene ID: HRGMv2_0409_1_62
Type: TC
Location: 57136 - 58650 (-)
Gene ID: HRGMv2_0409_1_63
Type: TC
Location: 58711 - 59787 (-)
Gene ID: HRGMv2_0409_1_64
Type: TC
Location: 59821 - 61449 (-)
Gene ID: HRGMv2_0409_1_65
Type: TC
Location: 61478 - 62065 (-)
Gene ID: HRGMv2_0409_1_66
Type: TC
Location: 62056 - 62406 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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