Cluster: HRGMv2_0409_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0409
- CGC Family ID: CGCFAM_09659
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0409_5 | HRGMv2_0409_5_62 | 82714 | 83892 | - | 2.A.1.2.97 |
| NULL(UNKNOWN) | HRGMv2_0409_5 | HRGMv2_0409_5_63 | 84106 | 85203 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0409_5 | HRGMv2_0409_5_64 | 85324 | 86607 | - | SDH_alpha |
| TC | HRGMv2_0409_5 | HRGMv2_0409_5_65 | 86696 | 88654 | - | 2.A.67.4.2 |
| STP | HRGMv2_0409_5 | HRGMv2_0409_5_66 | 89003 | 89941 | - | Pribosyltran |
| CAZyme | HRGMv2_0409_5 | HRGMv2_0409_5_67 | 90021 | 91742 | - | GH13_38 |
Gene ID: HRGMv2_0409_5_62
Type: TC
Location: 82714 - 83892 (-)
Type: TC
Location: 82714 - 83892 (-)
Gene ID: HRGMv2_0409_5_63
Type:
Location: 84106 - 85203 (+)
Type:
Location: 84106 - 85203 (+)
Gene ID: HRGMv2_0409_5_64
Type: pfam
Location: 85324 - 86607 (-)
Type: pfam
Location: 85324 - 86607 (-)
Gene ID: HRGMv2_0409_5_65
Type: TC
Location: 86696 - 88654 (-)
Type: TC
Location: 86696 - 88654 (-)
Gene ID: HRGMv2_0409_5_66
Type: STP
Location: 89003 - 89941 (-)
Type: STP
Location: 89003 - 89941 (-)
Gene ID: HRGMv2_0409_5_67
Type: CAZyme
Location: 90021 - 91742 (-)
Type: CAZyme
Location: 90021 - 91742 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_A
Species
Barnesiella_A excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.