Cluster: HRGMv2_0409_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0409
- CGC Family ID: CGCFAM_00124
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0409_4 | HRGMv2_0409_4_97 | 135039 | 136004 | + | GT2 |
| peptidase | HRGMv2_0409_4 | HRGMv2_0409_4_98 | 136030 | 137112 | - | M20.UPA |
| TC | HRGMv2_0409_4 | HRGMv2_0409_4_99 | 137889 | 139619 | - | 3.A.1.21.1 |
| pfam | HRGMv2_0409_4 | HRGMv2_0409_4_100 | 139628 | 140248 | - | Methyltransf_2 | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_0409_4 | HRGMv2_0409_4_101 | 140256 | 142058 | - | 3.A.1.21.1 |
Gene ID: HRGMv2_0409_4_97
Type: CAZyme
Location: 135039 - 136004 (+)
Type: CAZyme
Location: 135039 - 136004 (+)
Gene ID: HRGMv2_0409_4_98
Type: peptidase
Location: 136030 - 137112 (-)
Type: peptidase
Location: 136030 - 137112 (-)
Gene ID: HRGMv2_0409_4_99
Type: TC
Location: 137889 - 139619 (-)
Type: TC
Location: 137889 - 139619 (-)
Gene ID: HRGMv2_0409_4_100
Type: pfam
Location: 139628 - 140248 (-)
Type: pfam
Location: 139628 - 140248 (-)
Gene ID: HRGMv2_0409_4_101
Type: TC
Location: 140256 - 142058 (-)
Type: TC
Location: 140256 - 142058 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_A
Species
Barnesiella_A excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.