Cluster: HRGMv2_0409_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0409
- CGC Family ID: CGCFAM_00442
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0409_4 | HRGMv2_0409_4_2 | 1168 | 3435 | - | GH36 |
| pfam | HRGMv2_0409_4 | HRGMv2_0409_4_3 | 3607 | 5463 | - | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| TC | HRGMv2_0409_4 | HRGMv2_0409_4_4 | 5557 | 7125 | - | 8.A.46.1.6 |
| TC | HRGMv2_0409_4 | HRGMv2_0409_4_5 | 7146 | 10217 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0409_4 | HRGMv2_0409_4_6 | 10230 | 12464 | - | GH97 |
| CAZyme | HRGMv2_0409_4 | HRGMv2_0409_4_7 | 12470 | 14647 | - | GH36 |
| CAZyme | HRGMv2_0409_4 | HRGMv2_0409_4_8 | 14841 | 17240 | - | GH95 |
Gene ID: HRGMv2_0409_4_2
Type: CAZyme
Location: 1168 - 3435 (-)
Type: CAZyme
Location: 1168 - 3435 (-)
Gene ID: HRGMv2_0409_4_3
Type: pfam
Location: 3607 - 5463 (-)
Type: pfam
Location: 3607 - 5463 (-)
Gene ID: HRGMv2_0409_4_4
Type: TC
Location: 5557 - 7125 (-)
Type: TC
Location: 5557 - 7125 (-)
Gene ID: HRGMv2_0409_4_5
Type: TC
Location: 7146 - 10217 (-)
Type: TC
Location: 7146 - 10217 (-)
Gene ID: HRGMv2_0409_4_6
Type: CAZyme
Location: 10230 - 12464 (-)
Type: CAZyme
Location: 10230 - 12464 (-)
Gene ID: HRGMv2_0409_4_7
Type: CAZyme
Location: 12470 - 14647 (-)
Type: CAZyme
Location: 12470 - 14647 (-)
Gene ID: HRGMv2_0409_4_8
Type: CAZyme
Location: 14841 - 17240 (-)
Type: CAZyme
Location: 14841 - 17240 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_A
Species
Barnesiella_A excrementipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.