Cluster: HRGMv2_0408_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0408
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0408_21 | HRGMv2_0408_21_8 | 5318 | 6502 | - | 2.A.1.7.17 |
| CAZyme | HRGMv2_0408_21 | HRGMv2_0408_21_9 | 6505 | 8343 | - | GH32 |
| TF | HRGMv2_0408_21 | HRGMv2_0408_21_10 | 8562 | 11309 | + | HTH_AraC |
| TC | HRGMv2_0408_21 | HRGMv2_0408_21_11 | 11516 | 14611 | + | 1.B.14.6.1 |
| TC | HRGMv2_0408_21 | HRGMv2_0408_21_12 | 14625 | 16355 | + | 8.A.46.1.5 |
| pfam | HRGMv2_0408_21 | HRGMv2_0408_21_13 | 16367 | 17740 | + | DUF4960 |
| CAZyme | HRGMv2_0408_21 | HRGMv2_0408_21_14 | 17756 | 19285 | + | GH32 |
Gene ID: HRGMv2_0408_21_8
Type: TC
Location: 5318 - 6502 (-)
Type: TC
Location: 5318 - 6502 (-)
Gene ID: HRGMv2_0408_21_9
Type: CAZyme
Location: 6505 - 8343 (-)
Type: CAZyme
Location: 6505 - 8343 (-)
Gene ID: HRGMv2_0408_21_10
Type: TF
Location: 8562 - 11309 (+)
Type: TF
Location: 8562 - 11309 (+)
Gene ID: HRGMv2_0408_21_11
Type: TC
Location: 11516 - 14611 (+)
Type: TC
Location: 11516 - 14611 (+)
Gene ID: HRGMv2_0408_21_12
Type: TC
Location: 14625 - 16355 (+)
Type: TC
Location: 14625 - 16355 (+)
Gene ID: HRGMv2_0408_21_13
Type: pfam
Location: 16367 - 17740 (+)
Type: pfam
Location: 16367 - 17740 (+)
Gene ID: HRGMv2_0408_21_14
Type: CAZyme
Location: 17756 - 19285 (+)
Type: CAZyme
Location: 17756 - 19285 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp030536615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.