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Cluster: HRGMv2_0408_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0408_16 HRGMv2_0408_16_27 26099 28750 - 9.B.144.1.4
CAZyme HRGMv2_0408_16 HRGMv2_0408_16_28 28808 30043 - GT4
pfam HRGMv2_0408_16 HRGMv2_0408_16_29 30040 31515 - Polysacc_synt
STP HRGMv2_0408_16 HRGMv2_0408_16_30 31552 32571 - AAA
CAZyme HRGMv2_0408_16 HRGMv2_0408_16_31 32574 33686 - GT9
pfam HRGMv2_0408_16 HRGMv2_0408_16_32 33664 34293 - DUF4254
TC HRGMv2_0408_16 HRGMv2_0408_16_33 34397 35749 - 2.A.66.1.41
TC HRGMv2_0408_16 HRGMv2_0408_16_34 35909 36604 - 1.A.14.2.2
Gene ID: HRGMv2_0408_16_27
Type: TC
Location: 26099 - 28750 (-)
Gene ID: HRGMv2_0408_16_28
Type: CAZyme
Location: 28808 - 30043 (-)
Gene ID: HRGMv2_0408_16_29
Type: pfam
Location: 30040 - 31515 (-)
Gene ID: HRGMv2_0408_16_30
Type: STP
Location: 31552 - 32571 (-)
Gene ID: HRGMv2_0408_16_31
Type: CAZyme
Location: 32574 - 33686 (-)
Gene ID: HRGMv2_0408_16_32
Type: pfam
Location: 33664 - 34293 (-)
Gene ID: HRGMv2_0408_16_33
Type: TC
Location: 34397 - 35749 (-)
Gene ID: HRGMv2_0408_16_34
Type: TC
Location: 35909 - 36604 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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