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Cluster: HRGMv2_0408_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0408_11 HRGMv2_0408_11_57 64941 65930 - 2.A.69.3.5
pfam HRGMv2_0408_11 HRGMv2_0408_11_58 65985 67754 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
pfam HRGMv2_0408_11 HRGMv2_0408_11_59 67776 69104 - CoA_transf_3
TC HRGMv2_0408_11 HRGMv2_0408_11_60 69341 71191 + 2.A.58.2.4
TF HRGMv2_0408_11 HRGMv2_0408_11_61 71445 71912 + HTH_11
CAZyme HRGMv2_0408_11 HRGMv2_0408_11_62 71940 73340 + GH13
TC HRGMv2_0408_11 HRGMv2_0408_11_63 73440 74546 + 3.D.2.2.1
Gene ID: HRGMv2_0408_11_57
Type: TC
Location: 64941 - 65930 (-)
Gene ID: HRGMv2_0408_11_58
Type: pfam
Location: 65985 - 67754 (-)
Gene ID: HRGMv2_0408_11_59
Type: pfam
Location: 67776 - 69104 (-)
Gene ID: HRGMv2_0408_11_60
Type: TC
Location: 69341 - 71191 (+)
Gene ID: HRGMv2_0408_11_61
Type: TF
Location: 71445 - 71912 (+)
Gene ID: HRGMv2_0408_11_62
Type: CAZyme
Location: 71940 - 73340 (+)
Gene ID: HRGMv2_0408_11_63
Type: TC
Location: 73440 - 74546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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