Cluster: HRGMv2_0408_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0408
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0408_11 | HRGMv2_0408_11_26 | 25142 | 26284 | - | GT28 |
| TC | HRGMv2_0408_11 | HRGMv2_0408_11_27 | 26281 | 27624 | - | 2.A.103.1.3 |
| pfam | HRGMv2_0408_11 | HRGMv2_0408_11_28 | 27646 | 28986 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_0408_11 | HRGMv2_0408_11_29 | 28983 | 30233 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_0408_11_26
Type: CAZyme
Location: 25142 - 26284 (-)
Type: CAZyme
Location: 25142 - 26284 (-)
Gene ID: HRGMv2_0408_11_27
Type: TC
Location: 26281 - 27624 (-)
Type: TC
Location: 26281 - 27624 (-)
Gene ID: HRGMv2_0408_11_28
Type: pfam
Location: 27646 - 28986 (-)
Type: pfam
Location: 27646 - 28986 (-)
Gene ID: HRGMv2_0408_11_29
Type: TC
Location: 28983 - 30233 (-)
Type: TC
Location: 28983 - 30233 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp030536615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.