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Cluster: HRGMv2_0407_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0407_8 HRGMv2_0407_8_27 26099 28750 - 9.B.144.1.4
CAZyme HRGMv2_0407_8 HRGMv2_0407_8_28 28808 30043 - GT4
pfam HRGMv2_0407_8 HRGMv2_0407_8_29 30040 31536 - Polysacc_synt
STP HRGMv2_0407_8 HRGMv2_0407_8_30 31552 32571 - AAA
CAZyme HRGMv2_0407_8 HRGMv2_0407_8_31 32574 33686 - GT9
pfam HRGMv2_0407_8 HRGMv2_0407_8_32 33664 34296 - DUF4254
TC HRGMv2_0407_8 HRGMv2_0407_8_33 34400 35797 - 2.A.66.1.41
TC HRGMv2_0407_8 HRGMv2_0407_8_34 35853 36548 - 1.A.14.2.2
Gene ID: HRGMv2_0407_8_27
Type: TC
Location: 26099 - 28750 (-)
Gene ID: HRGMv2_0407_8_28
Type: CAZyme
Location: 28808 - 30043 (-)
Gene ID: HRGMv2_0407_8_29
Type: pfam
Location: 30040 - 31536 (-)
Gene ID: HRGMv2_0407_8_30
Type: STP
Location: 31552 - 32571 (-)
Gene ID: HRGMv2_0407_8_31
Type: CAZyme
Location: 32574 - 33686 (-)
Gene ID: HRGMv2_0407_8_32
Type: pfam
Location: 33664 - 34296 (-)
Gene ID: HRGMv2_0407_8_33
Type: TC
Location: 34400 - 35797 (-)
Gene ID: HRGMv2_0407_8_34
Type: TC
Location: 35853 - 36548 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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