Cluster: HRGMv2_0407_CGC5
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0407
- CGC Family ID: CGCFAM_09657
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_30 | 30074 | 31372 | - | 9.B.168.1.2 |
| pfam | HRGMv2_0407_6 | HRGMv2_0407_6_31 | 31461 | 32204 | - | Ubie_methyltran | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| pfam | HRGMv2_0407_6 | HRGMv2_0407_6_32 | 32201 | 33199 | - | PhoH | AAA_19 | AAA_30 |
| CAZyme | HRGMv2_0407_6 | HRGMv2_0407_6_33 | 33174 | 34802 | - | GT83 |
| STP | HRGMv2_0407_6 | HRGMv2_0407_6_34 | 34994 | 35164 | - | Fer4 | Fer4 |
| CAZyme | HRGMv2_0407_6 | HRGMv2_0407_6_35 | 35431 | 38790 | - | GH43_3 |
| pfam | HRGMv2_0407_6 | HRGMv2_0407_6_36 | 39120 | 40865 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_37 | 40892 | 44242 | - | 1.B.14.6.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_38 | 44890 | 46089 | - | 1.B.6.1.6 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_39 | 46379 | 47857 | - | 3.D.1.5.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_40 | 47882 | 49387 | - | 3.D.1.5.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_41 | 49449 | 51419 | - | 3.D.1.2.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_42 | 51426 | 51767 | - | 3.D.1.8.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_43 | 51780 | 52292 | - | 3.D.9.1.1 |
| STP | HRGMv2_0407_6 | HRGMv2_0407_6_44 | 52299 | 52958 | - | Fer4 | Fer4 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_45 | 53032 | 53925 | - | 3.A.2.1.7 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_46 | 53982 | 55559 | - | 3.A.2.1.3 |
| pfam | HRGMv2_0407_6 | HRGMv2_0407_6_47 | 55584 | 56129 | - | OSCP |
| pfam | HRGMv2_0407_6 | HRGMv2_0407_6_48 | 56145 | 56660 | - | ATP-synt_B |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_49 | 56722 | 56961 | - | 3.A.2.1.6 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_50 | 57033 | 58208 | - | 3.A.2.1.7 |
| pfam | HRGMv2_0407_6 | HRGMv2_0407_6_51 | 58222 | 58458 | - | ATP-synt_DE_N |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_52 | 58495 | 59997 | - | 3.A.2.1.2 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_53 | 60048 | 61130 | - | 3.D.1.5.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_54 | 61230 | 62873 | - | 3.D.1.5.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_55 | 62932 | 63531 | - | 3.D.1.3.1 |
| TC | HRGMv2_0407_6 | HRGMv2_0407_6_56 | 63522 | 63902 | - | 3.D.1.8.1 |
Gene ID: HRGMv2_0407_6_30
Type: TC
Location: 30074 - 31372 (-)
Type: TC
Location: 30074 - 31372 (-)
Gene ID: HRGMv2_0407_6_31
Type: pfam
Location: 31461 - 32204 (-)
Type: pfam
Location: 31461 - 32204 (-)
Gene ID: HRGMv2_0407_6_32
Type: pfam
Location: 32201 - 33199 (-)
Type: pfam
Location: 32201 - 33199 (-)
Gene ID: HRGMv2_0407_6_33
Type: CAZyme
Location: 33174 - 34802 (-)
Type: CAZyme
Location: 33174 - 34802 (-)
Gene ID: HRGMv2_0407_6_34
Type: STP
Location: 34994 - 35164 (-)
Type: STP
Location: 34994 - 35164 (-)
Gene ID: HRGMv2_0407_6_35
Type: CAZyme
Location: 35431 - 38790 (-)
Type: CAZyme
Location: 35431 - 38790 (-)
Gene ID: HRGMv2_0407_6_36
Type: pfam
Location: 39120 - 40865 (-)
Type: pfam
Location: 39120 - 40865 (-)
Gene ID: HRGMv2_0407_6_37
Type: TC
Location: 40892 - 44242 (-)
Type: TC
Location: 40892 - 44242 (-)
Gene ID: HRGMv2_0407_6_38
Type: TC
Location: 44890 - 46089 (-)
Type: TC
Location: 44890 - 46089 (-)
Gene ID: HRGMv2_0407_6_39
Type: TC
Location: 46379 - 47857 (-)
Type: TC
Location: 46379 - 47857 (-)
Gene ID: HRGMv2_0407_6_40
Type: TC
Location: 47882 - 49387 (-)
Type: TC
Location: 47882 - 49387 (-)
Gene ID: HRGMv2_0407_6_41
Type: TC
Location: 49449 - 51419 (-)
Type: TC
Location: 49449 - 51419 (-)
Gene ID: HRGMv2_0407_6_42
Type: TC
Location: 51426 - 51767 (-)
Type: TC
Location: 51426 - 51767 (-)
Gene ID: HRGMv2_0407_6_43
Type: TC
Location: 51780 - 52292 (-)
Type: TC
Location: 51780 - 52292 (-)
Gene ID: HRGMv2_0407_6_44
Type: STP
Location: 52299 - 52958 (-)
Type: STP
Location: 52299 - 52958 (-)
Gene ID: HRGMv2_0407_6_45
Type: TC
Location: 53032 - 53925 (-)
Type: TC
Location: 53032 - 53925 (-)
Gene ID: HRGMv2_0407_6_46
Type: TC
Location: 53982 - 55559 (-)
Type: TC
Location: 53982 - 55559 (-)
Gene ID: HRGMv2_0407_6_47
Type: pfam
Location: 55584 - 56129 (-)
Type: pfam
Location: 55584 - 56129 (-)
Gene ID: HRGMv2_0407_6_48
Type: pfam
Location: 56145 - 56660 (-)
Type: pfam
Location: 56145 - 56660 (-)
Gene ID: HRGMv2_0407_6_49
Type: TC
Location: 56722 - 56961 (-)
Type: TC
Location: 56722 - 56961 (-)
Gene ID: HRGMv2_0407_6_50
Type: TC
Location: 57033 - 58208 (-)
Type: TC
Location: 57033 - 58208 (-)
Gene ID: HRGMv2_0407_6_51
Type: pfam
Location: 58222 - 58458 (-)
Type: pfam
Location: 58222 - 58458 (-)
Gene ID: HRGMv2_0407_6_52
Type: TC
Location: 58495 - 59997 (-)
Type: TC
Location: 58495 - 59997 (-)
Gene ID: HRGMv2_0407_6_53
Type: TC
Location: 60048 - 61130 (-)
Type: TC
Location: 60048 - 61130 (-)
Gene ID: HRGMv2_0407_6_54
Type: TC
Location: 61230 - 62873 (-)
Type: TC
Location: 61230 - 62873 (-)
Gene ID: HRGMv2_0407_6_55
Type: TC
Location: 62932 - 63531 (-)
Type: TC
Location: 62932 - 63531 (-)
Gene ID: HRGMv2_0407_6_56
Type: TC
Location: 63522 - 63902 (-)
Type: TC
Location: 63522 - 63902 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp030536615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.