Cluster: HRGMv2_0407_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0407
- CGC Family ID: CGCFAM_00028
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0407_38 | HRGMv2_0407_38_2 | 837 | 2792 | + | GH133 |
| CAZyme | HRGMv2_0407_38 | HRGMv2_0407_38_3 | 2819 | 4078 | + | GT4 |
| CAZyme | HRGMv2_0407_38 | HRGMv2_0407_38_4 | 4100 | 5518 | + | GH57 |
| pfam | HRGMv2_0407_38 | HRGMv2_0407_38_5 | 5560 | 6348 | + | GYF_2 | GYF_2 |
| TC | HRGMv2_0407_38 | HRGMv2_0407_38_6 | 6402 | 8330 | - | 2.A.16.2.2 |
Gene ID: HRGMv2_0407_38_2
Type: CAZyme
Location: 837 - 2792 (+)
Type: CAZyme
Location: 837 - 2792 (+)
Gene ID: HRGMv2_0407_38_3
Type: CAZyme
Location: 2819 - 4078 (+)
Type: CAZyme
Location: 2819 - 4078 (+)
Gene ID: HRGMv2_0407_38_4
Type: CAZyme
Location: 4100 - 5518 (+)
Type: CAZyme
Location: 4100 - 5518 (+)
Gene ID: HRGMv2_0407_38_5
Type: pfam
Location: 5560 - 6348 (+)
Type: pfam
Location: 5560 - 6348 (+)
Gene ID: HRGMv2_0407_38_6
Type: TC
Location: 6402 - 8330 (-)
Type: TC
Location: 6402 - 8330 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp030536615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.