Cluster: HRGMv2_0407_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0407
- CGC Family ID: CGCFAM_09655
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0407_19 | HRGMv2_0407_19_2 | 1264 | 2922 | + | 4.C.1.1.4 |
| STP | HRGMv2_0407_19 | HRGMv2_0407_19_3 | 2929 | 4266 | + | HD |
| pfam | HRGMv2_0407_19 | HRGMv2_0407_19_4 | 4283 | 5545 | + | TPM_phosphatase |
| CAZyme | HRGMv2_0407_19 | HRGMv2_0407_19_5 | 5613 | 7844 | + | GH20 |
| TC | HRGMv2_0407_19 | HRGMv2_0407_19_6 | 7914 | 10517 | + | 3.A.9.1.2 |
| CAZyme | HRGMv2_0407_19 | HRGMv2_0407_19_7 | 10759 | 12666 | + | GT2 |
Gene ID: HRGMv2_0407_19_2
Type: TC
Location: 1264 - 2922 (+)
Type: TC
Location: 1264 - 2922 (+)
Gene ID: HRGMv2_0407_19_3
Type: STP
Location: 2929 - 4266 (+)
Type: STP
Location: 2929 - 4266 (+)
Gene ID: HRGMv2_0407_19_4
Type: pfam
Location: 4283 - 5545 (+)
Type: pfam
Location: 4283 - 5545 (+)
Gene ID: HRGMv2_0407_19_5
Type: CAZyme
Location: 5613 - 7844 (+)
Type: CAZyme
Location: 5613 - 7844 (+)
Gene ID: HRGMv2_0407_19_6
Type: TC
Location: 7914 - 10517 (+)
Type: TC
Location: 7914 - 10517 (+)
Gene ID: HRGMv2_0407_19_7
Type: CAZyme
Location: 10759 - 12666 (+)
Type: CAZyme
Location: 10759 - 12666 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp030536615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.