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Cluster: HRGMv2_0407_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0407_10 HRGMv2_0407_10_4 3216 4322 - 3.D.2.3.1
CAZyme HRGMv2_0407_10 HRGMv2_0407_10_5 4421 5821 - GH13
TF HRGMv2_0407_10 HRGMv2_0407_10_6 5849 6316 - HTH_11
TC HRGMv2_0407_10 HRGMv2_0407_10_7 6571 8421 - 2.A.58.2.4
pfam HRGMv2_0407_10 HRGMv2_0407_10_8 8657 9982 + CoA_transf_3
pfam HRGMv2_0407_10 HRGMv2_0407_10_9 10004 11773 + TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TC HRGMv2_0407_10 HRGMv2_0407_10_10 11827 12816 + 2.A.69.3.5
Gene ID: HRGMv2_0407_10_4
Type: TC
Location: 3216 - 4322 (-)
Gene ID: HRGMv2_0407_10_5
Type: CAZyme
Location: 4421 - 5821 (-)
Gene ID: HRGMv2_0407_10_6
Type: TF
Location: 5849 - 6316 (-)
Gene ID: HRGMv2_0407_10_7
Type: TC
Location: 6571 - 8421 (-)
Gene ID: HRGMv2_0407_10_8
Type: pfam
Location: 8657 - 9982 (+)
Gene ID: HRGMv2_0407_10_9
Type: pfam
Location: 10004 - 11773 (+)
Gene ID: HRGMv2_0407_10_10
Type: TC
Location: 11827 - 12816 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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