Cluster: HRGMv2_0399_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0399
- CGC Family ID: CGCFAM_00181
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0399_4 | HRGMv2_0399_4_47 | 60022 | 62763 | + | GH2 |
| pfam | HRGMv2_0399_4 | HRGMv2_0399_4_48 | 62966 | 64372 | + | CitMHS |
| pfam | HRGMv2_0399_4 | HRGMv2_0399_4_49 | 64415 | 65392 | + | PFK |
| TC | HRGMv2_0399_4 | HRGMv2_0399_4_50 | 65546 | 67072 | + | 3.A.2.1.7 |
| pfam | HRGMv2_0399_4 | HRGMv2_0399_4_51 | 67099 | 67341 | + | ATP-synt_DE_N |
| NULL(UNKNOWN) | HRGMv2_0399_4 | HRGMv2_0399_4_52 | 67354 | 67770 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0399_4 | HRGMv2_0399_4_53 | 67794 | 68846 | + | 3.A.2.1.7 |
Gene ID: HRGMv2_0399_4_47
Type: CAZyme
Location: 60022 - 62763 (+)
Type: CAZyme
Location: 60022 - 62763 (+)
Gene ID: HRGMv2_0399_4_48
Type: pfam
Location: 62966 - 64372 (+)
Type: pfam
Location: 62966 - 64372 (+)
Gene ID: HRGMv2_0399_4_49
Type: pfam
Location: 64415 - 65392 (+)
Type: pfam
Location: 64415 - 65392 (+)
Gene ID: HRGMv2_0399_4_50
Type: TC
Location: 65546 - 67072 (+)
Type: TC
Location: 65546 - 67072 (+)
Gene ID: HRGMv2_0399_4_51
Type: pfam
Location: 67099 - 67341 (+)
Type: pfam
Location: 67099 - 67341 (+)
Gene ID: HRGMv2_0399_4_52
Type:
Location: 67354 - 67770 (+)
Type:
Location: 67354 - 67770 (+)
Gene ID: HRGMv2_0399_4_53
Type: TC
Location: 67794 - 68846 (+)
Type: TC
Location: 67794 - 68846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp902495455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0399_4_50 | vegan > omnivore | 1.10900 | 0.04449 |