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Cluster: HRGMv2_0399_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0399_2 HRGMv2_0399_2_82 105790 107037 + 3.A.1.125.1
TC HRGMv2_0399_2 HRGMv2_0399_2_83 107108 108778 + 4.C.1.1.15
TC HRGMv2_0399_2 HRGMv2_0399_2_84 108786 110447 + 4.C.1.1.7
pfam HRGMv2_0399_2 HRGMv2_0399_2_85 110546 110863 - rhaM
CAZyme HRGMv2_0399_2 HRGMv2_0399_2_86 110860 111777 - GT2
pfam HRGMv2_0399_2 HRGMv2_0399_2_87 112074 113474 - UxaC
pfam HRGMv2_0399_2 HRGMv2_0399_2_88 113638 114672 + Asparaginase | Asparaginase_C
TC HRGMv2_0399_2 HRGMv2_0399_2_89 114721 115944 + 2.A.1.46.5
Gene ID: HRGMv2_0399_2_82
Type: TC
Location: 105790 - 107037 (+)
Gene ID: HRGMv2_0399_2_83
Type: TC
Location: 107108 - 108778 (+)
Gene ID: HRGMv2_0399_2_84
Type: TC
Location: 108786 - 110447 (+)
Gene ID: HRGMv2_0399_2_85
Type: pfam
Location: 110546 - 110863 (-)
Gene ID: HRGMv2_0399_2_86
Type: CAZyme
Location: 110860 - 111777 (-)
Gene ID: HRGMv2_0399_2_87
Type: pfam
Location: 112074 - 113474 (-)
Gene ID: HRGMv2_0399_2_88
Type: pfam
Location: 113638 - 114672 (+)
Gene ID: HRGMv2_0399_2_89
Type: TC
Location: 114721 - 115944 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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