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Cluster: HRGMv2_0399_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0399_14 HRGMv2_0399_14_36 41641 42618 - CE8
STP HRGMv2_0399_14 HRGMv2_0399_14_37 42674 44944 - ACT | HD
CAZyme HRGMv2_0399_14 HRGMv2_0399_14_38 45076 46374 - GH23
pfam HRGMv2_0399_14 HRGMv2_0399_14_39 46461 47237 - DUF5683
pfam HRGMv2_0399_14 HRGMv2_0399_14_40 47264 48193 - ParBc | HTH_ParB | ParB_dimer
TC HRGMv2_0399_14 HRGMv2_0399_14_41 48415 49176 - 8.A.3.2.3
NULL(UNKNOWN) HRGMv2_0399_14 HRGMv2_0399_14_42 49322 49432 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0399_14 HRGMv2_0399_14_43 50140 50910 + SurE
CAZyme HRGMv2_0399_14 HRGMv2_0399_14_44 51221 52459 + GT19
Gene ID: HRGMv2_0399_14_36
Type: CAZyme
Location: 41641 - 42618 (-)
Gene ID: HRGMv2_0399_14_37
Type: STP
Location: 42674 - 44944 (-)
Gene ID: HRGMv2_0399_14_38
Type: CAZyme
Location: 45076 - 46374 (-)
Gene ID: HRGMv2_0399_14_39
Type: pfam
Location: 46461 - 47237 (-)
Gene ID: HRGMv2_0399_14_40
Type: pfam
Location: 47264 - 48193 (-)
Gene ID: HRGMv2_0399_14_41
Type: TC
Location: 48415 - 49176 (-)
Gene ID: HRGMv2_0399_14_42
Type:
Location: 49322 - 49432 (+)
Gene ID: HRGMv2_0399_14_43
Type: pfam
Location: 50140 - 50910 (+)
Gene ID: HRGMv2_0399_14_44
Type: CAZyme
Location: 51221 - 52459 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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