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Cluster: HRGMv2_0399_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0399_11 HRGMv2_0399_11_47 52641 54041 + CBM50
pfam HRGMv2_0399_11 HRGMv2_0399_11_48 54051 54812 + OMP_b-brl_2
TC HRGMv2_0399_11 HRGMv2_0399_11_49 54816 56351 + 2.A.17.1.7
pfam HRGMv2_0399_11 HRGMv2_0399_11_50 56626 57609 + Exo_endo_phos | Exo_endo_phos_3
TC HRGMv2_0399_11 HRGMv2_0399_11_51 57776 59389 - 2.A.1.53.5
peptidase HRGMv2_0399_11 HRGMv2_0399_11_52 59447 61621 - S09.UPC
TC HRGMv2_0399_11 HRGMv2_0399_11_53 61761 63653 - 2.A.9.3.1
peptidase HRGMv2_0399_11 HRGMv2_0399_11_54 63646 65256 - C26.964
TC HRGMv2_0399_11 HRGMv2_0399_11_55 65505 66806 + 9.B.168.1.2
Gene ID: HRGMv2_0399_11_47
Type: CAZyme
Location: 52641 - 54041 (+)
Gene ID: HRGMv2_0399_11_48
Type: pfam
Location: 54051 - 54812 (+)
Gene ID: HRGMv2_0399_11_49
Type: TC
Location: 54816 - 56351 (+)
Gene ID: HRGMv2_0399_11_50
Type: pfam
Location: 56626 - 57609 (+)
Gene ID: HRGMv2_0399_11_51
Type: TC
Location: 57776 - 59389 (-)
Gene ID: HRGMv2_0399_11_52
Type: peptidase
Location: 59447 - 61621 (-)
Gene ID: HRGMv2_0399_11_53
Type: TC
Location: 61761 - 63653 (-)
Gene ID: HRGMv2_0399_11_54
Type: peptidase
Location: 63646 - 65256 (-)
Gene ID: HRGMv2_0399_11_55
Type: TC
Location: 65505 - 66806 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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